Skip to content

Check for and Merge Duplicate annotations in Mondo

Check for and Merge Duplicate annotations in Mondo

Description

This command will check for and fix duplicate annotations, such as duplicate is_a assertions (parents), duplicate synonyms, and duplicate xrefs.

Instructions

  1. Navigate to src/ontology
  2. Create a branch
  3. In Terminal run :
  4. sh run.sh make NORM
  5. mv NORM mondo-edit.obo
  6. Check the diff in GitHub Desktop. If everything looks okay, commit and create a Pull Request.
  7. For example, see https://github.com/monarch-initiative/mondo/pull/3802